STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1217Conserved hypothetical protein; Similar to GB:L77117 SP:Q60332 PID:1498780 percent identity: 39.94; identified by sequence similarity; putative. (341 aa)    
Predicted Functional Partners:
AF_1218
Predicted coding region AF_1218; Hypothetical protein; identified by GeneMark; putative.
       0.863
uppS
Conserved hypothetical protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
       0.863
lysS
lysyl-tRNA synthetase (lysS); Similar to GB:L77117 SP:Q57959 PID:1591243 percent identity: 43.60; identified by sequence similarity; putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.845
prf1
Peptide chain release factor eRF, subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
       0.802
AF_1221
Predicted coding region AF_1221; Hypothetical protein; identified by GeneMark; putative.
       0.767
AF_2058
Conserved hypothetical protein; Similar to GB:L77117 PID:1499875 percent identity: 31.73; identified by sequence similarity; putative.
 
     0.711
AF_2414
Conserved hypothetical protein; Similar to GB:L77117 PID:1592176 percent identity: 52.42; identified by sequence similarity; putative.
  
     0.663
AF_1322
Conserved hypothetical protein; Similar to GB:L77117 PID:1591634 percent identity: 33.23; identified by sequence similarity; putative.
 
     0.652
cetZ
Cell division protein, putative; Involved in cell shape control; Belongs to the CetZ family.
 
     0.610
argS
arginyl-tRNA synthetase (argS); Similar to GB:L77117 SP:Q57689 PID:1590971 percent identity: 48.77; identified by sequence similarity; putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.583
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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