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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1226Predicted coding region AF_1226; Hypothetical protein; identified by GeneMark; putative. (168 aa)    
Predicted Functional Partners:
AF_1225
Predicted coding region AF_1225; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_1227
Predicted coding region AF_1227; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_1228
Predicted coding region AF_1228; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_1229
Conserved hypothetical protein; Similar to GB:L77117 PID:1592186 percent identity: 29.97; identified by sequence similarity; putative.
       0.623
AF_1223
Conserved hypothetical protein; Similar to SP:P31125 GB:U00096 PID:1787813 percent identity: 21.40; identified by sequence similarity; putative.
       0.615
AF_1224
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58188 PID:1499598 percent identity: 47.18; identified by sequence similarity; putative.
       0.615
AF_1230
Predicted coding region AF_1230; Hypothetical protein; identified by GeneMark; putative.
       0.595
AF_1231
Predicted coding region AF_1231; Hypothetical protein; identified by GeneMark; putative.
       0.595
AF_1232
Conserved hypothetical protein; Similar to GP:1707681 percent identity: 30.90; identified by sequence similarity; putative.
       0.438
AF_1233
Conserved hypothetical protein; Similar to GP:1787271 percent identity: 28.95; identified by sequence similarity; putative.
       0.438
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.