Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AF_1236Predicted coding region AF_1236; Hypothetical protein; identified by GeneMark; putative. (174 aa)    
Predicted Functional Partners:
AF_0547
Reductase, iron-sulfur binding subunit; Similar to GP:1890198 percent identity: 28.33; identified by sequence similarity; putative.
      
 0.465
AF_1237
Predicted coding region AF_1237; Hypothetical protein; identified by GeneMark; putative.
      
 0.465
AF_0546
Nitrate reductase, gamma subunit (narI); Similar to GB:Z26255 percent identity: 30.14; identified by sequence similarity; putative.
      
 0.461
AF_1232
Conserved hypothetical protein; Similar to GP:1707681 percent identity: 30.90; identified by sequence similarity; putative.
       0.458
AF_1233
Conserved hypothetical protein; Similar to GP:1787271 percent identity: 28.95; identified by sequence similarity; putative.
       0.458
AF_1234
Mutator protein MutT (mutT); Similar to GB:L77117 PID:1500003 percent identity: 63.64; identified by sequence similarity; putative.
       0.458
tfs
Transcription-associated protein TFIIS; Induces RNA cleavage activity in the RNA polymerase. In its presence, the cleavage activity of the RNA polymerase truncates the RNA back to position +15 in a stepwise manner by releasing mainly dinucleotides from the 3'-end of the nascent RNA. The truncated RNAs are able to continue elongation. Involved in transcriptional proofreading and fidelity. Misincorporation of nucleotides during elongation of transcription leads to arrested elongation complexes which are rescued by TFS-promoted removal of a dinucleotide from the 3'-end. TFS is able to ind [...]
       0.458
AF_0808
Glycolate oxidase subunit (glcD); Similar to PID:1001103 PID:1001117 percent identity: 32.01; identified by sequence similarity; putative.
      
 0.405
AF_0811
Conserved hypothetical protein; Similar to GP:1657506 percent identity: 32.60; identified by sequence similarity; putative.
      
 0.405
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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