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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1237Predicted coding region AF_1237; Hypothetical protein; identified by GeneMark; putative. (297 aa)    
Predicted Functional Partners:
AF_0547
Reductase, iron-sulfur binding subunit; Similar to GP:1890198 percent identity: 28.33; identified by sequence similarity; putative.
  
   
 0.509
AF_1238
Heterodisulfide reductase, subunit A/methylviologen reducing hydrogenase, subunit delta; Part of a complex that catalyzes the reversible reduction of CoM-S-S-CoB to the thiol-coenzymes H-S-CoM (coenzyme M) and H-S-CoB (coenzyme B).
       0.499
AF_0546
Nitrate reductase, gamma subunit (narI); Similar to GB:Z26255 percent identity: 30.14; identified by sequence similarity; putative.
  
   
 0.489
AF_1236
Predicted coding region AF_1236; Hypothetical protein; identified by GeneMark; putative.
      
 0.424
AF_0808
Glycolate oxidase subunit (glcD); Similar to PID:1001103 PID:1001117 percent identity: 32.01; identified by sequence similarity; putative.
      
 0.418
AF_0811
Conserved hypothetical protein; Similar to GP:1657506 percent identity: 32.60; identified by sequence similarity; putative.
      
 0.418
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.