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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1239Ferredoxin (fdx-7); Similar to percent identity: 28.99; identified by sequence similarity; putative. (74 aa)    
Predicted Functional Partners:
AF_0286
Electron transfer flavoprotein, subunit beta (etfB); Similar to GP:1903329 percent identity: 38.80; identified by sequence similarity; putative.
   
 
 0.774
trpB2
Tryptophan synthase, subunit beta (trpB-1); The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.
       0.587
AF_0143
Conserved hypothetical protein; Similar to GB:L77117 PID:1592228 percent identity: 25.53; identified by sequence similarity; putative.
  
 
 0.548
AF_1381
F420-nonreducing hydrogenase (vhtG); Similar to PID:602582 percent identity: 46.11; identified by sequence similarity; putative.
   
  
 0.509
AF_0683
Succinate dehydrogenase, subunit C (sdhC); Similar to GP:1524299 percent identity: 36.56; identified by sequence similarity; putative.
  
  
 0.493
AF_1372
Methylviologen-reducing hydrogenase, subunit alpha (vhuA); Similar to GB:L77117 PID:1591820 percent identity: 39.40; identified by sequence similarity; putative.
  
  
 0.470
AF_1380
F420-nonreducing hydrogenase (vhtA); Similar to PID:602583 percent identity: 34.82; identified by sequence similarity; putative.
  
  
 0.470
hemC
Porphobilinogen deaminase (hemC); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
       0.435
hemL
Glutamate-1-semialdehyde aminotransferase (hemL); Similar to GB:L77117 SP:Q58020 PID:1591312 percent identity: 54.31; identified by sequence similarity; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
       0.433
AF_1243
uroporphyrin-III C-methyltransferase (cysG-2); Similar to GB:L77117 PID:1591629 percent identity: 52.52; identified by sequence similarity; putative.
       0.427
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.