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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1245Na+/H+ antiporter (napA-2); Similar to SP:P26235 PID:148316 percent identity: 28.41; identified by sequence similarity; putative. (338 aa)    
Predicted Functional Partners:
AF_1244
Predicted coding region AF_1244; Hypothetical protein; identified by GeneMark; putative.
 
  
 0.970
AF_2276
Conserved hypothetical protein; Similar to GB:L77117 PID:1591555 percent identity: 39.31; identified by sequence similarity; putative.
   
    0.820
AF_2406
ATP-dependent RNA helicase, putative; Similar to GB:L77117 PID:1592195 percent identity: 35.19; identified by sequence similarity; putative.
   
    0.817
hemC
Porphobilinogen deaminase (hemC); Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.
 
     0.782
AF_1057
Cytochrome C-type biogenesis protein (ccdA); Similar to SP:P45706 PID:870925 PID:1405449 GB:AL009126 percent identity: 30.69; identified by sequence similarity; putative.
  
    0.779
AF_1243
uroporphyrin-III C-methyltransferase (cysG-2); Similar to GB:L77117 PID:1591629 percent identity: 52.52; identified by sequence similarity; putative.
     
 0.750
AF_0524
Predicted coding region AF_0524; Hypothetical protein; identified by GeneMark; putative.
  
    0.741
hemL
Glutamate-1-semialdehyde aminotransferase (hemL); Similar to GB:L77117 SP:Q58020 PID:1591312 percent identity: 54.31; identified by sequence similarity; putative; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. HemL subfamily.
       0.741
AF_0698
Predicted coding region AF_0698; Hypothetical protein; identified by GeneMark; putative.
   
    0.733
AF_1528
Conserved hypothetical protein; Similar to GB:L77117 PID:1499710 percent identity: 23.20; identified by sequence similarity; putative.
   
    0.733
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.