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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1269Predicted coding region AF_1269; Hypothetical protein; identified by GeneMark; putative. (35 aa)    
Predicted Functional Partners:
AF_1270
Transcriptional regulatory protein, ArsR family; Similar to SP:P30346 GB:X65467 PID:47183 percent identity: 35.44; identified by sequence similarity; putative.
       0.661
purE
Phosphoribosylaminoimidazole carboxylase (purE); Catalyzes the reversible conversion of 5-aminoimidazole ribonucleotide (AIR) and CO(2) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
       0.661
purC
Phosphoribosylaminoimidazolesuccinocarboxamide synthase (purC); Similar to GB:L77117 PID:1592203 percent identity: 34.71; identified by sequence similarity; putative; Belongs to the SAICAR synthetase family. Highly divergent.
       0.661
carA
Carbamoyl-phosphate synthase, small (or glutamine) subunit (carA); Similar to GB:L77117 SP:Q58425 PID:1591677 percent identity: 55.17; identified by sequence similarity; putative; Belongs to the CarA family.
       0.661
carB
Carbamoyl-phosphate synthase, large (or ammonia) subunit (carB); Similar to PID:1001613 PID:1001668 percent identity: 65.08; identified by sequence similarity; putative.
       0.661
AF_1275
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57629 PID:1498937 percent identity: 51.82; identified by sequence similarity; putative.
       0.661
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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