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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1278Conserved hypothetical protein; Similar to GB:L77117 PID:1500366 percent identity: 57.80; identified by sequence similarity; putative. (407 aa)    
Predicted Functional Partners:
AF_1279
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58707 PID:1591950 percent identity: 30.05; identified by sequence similarity; putative.
 
     0.811
argB
Acetylglutamate kinase (argB); Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.
       0.756
AF_0646
Agmatinase (speB); Similar to GB:M32363 SP:P16936 PID:147859 PID:551839 PID:882466 percent identity: 33.33; identified by sequence similarity; putative; Belongs to the arginase family.
     
 0.488
AF_1281
Intracellular protease (pfpI); Similar to PID:1373331 percent identity: 56.02; identified by sequence similarity; putative; Belongs to the peptidase C56 family.
       0.411
AF_2365
Conserved hypothetical protein; Similar to PID:726070 GB:AE000666 percent identity: 46.36; identified by sequence similarity; putative; Belongs to the UPF0051 (ycf24) family.
   
    0.400
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.