Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AF_1281 | AF_1282 | Intracellular protease (pfpI); Similar to PID:1373331 percent identity: 56.02; identified by sequence similarity; putative; Belongs to the peptidase C56 family. | Conserved hypothetical protein; Similar to SP:Q60279 PID:1522657 GB:L77118 SP:Q60279 PID:1522657 percent identity: 28.76; identified by sequence similarity; putative. | 0.572 |
AF_1281 | AF_1283 | Intracellular protease (pfpI); Similar to PID:1373331 percent identity: 56.02; identified by sequence similarity; putative; Belongs to the peptidase C56 family. | Predicted coding region AF_1283; Hypothetical protein; identified by GeneMark; putative. | 0.572 |
AF_1281 | AF_1284 | Intracellular protease (pfpI); Similar to PID:1373331 percent identity: 56.02; identified by sequence similarity; putative; Belongs to the peptidase C56 family. | Thioredoxin (trx-3); Similar to SP:P00275 percent identity: 52.94; identified by sequence similarity; putative. | 0.584 |
AF_1282 | AF_1281 | Conserved hypothetical protein; Similar to SP:Q60279 PID:1522657 GB:L77118 SP:Q60279 PID:1522657 percent identity: 28.76; identified by sequence similarity; putative. | Intracellular protease (pfpI); Similar to PID:1373331 percent identity: 56.02; identified by sequence similarity; putative; Belongs to the peptidase C56 family. | 0.572 |
AF_1282 | AF_1283 | Conserved hypothetical protein; Similar to SP:Q60279 PID:1522657 GB:L77118 SP:Q60279 PID:1522657 percent identity: 28.76; identified by sequence similarity; putative. | Predicted coding region AF_1283; Hypothetical protein; identified by GeneMark; putative. | 0.773 |
AF_1282 | AF_1284 | Conserved hypothetical protein; Similar to SP:Q60279 PID:1522657 GB:L77118 SP:Q60279 PID:1522657 percent identity: 28.76; identified by sequence similarity; putative. | Thioredoxin (trx-3); Similar to SP:P00275 percent identity: 52.94; identified by sequence similarity; putative. | 0.588 |
AF_1283 | AF_1281 | Predicted coding region AF_1283; Hypothetical protein; identified by GeneMark; putative. | Intracellular protease (pfpI); Similar to PID:1373331 percent identity: 56.02; identified by sequence similarity; putative; Belongs to the peptidase C56 family. | 0.572 |
AF_1283 | AF_1282 | Predicted coding region AF_1283; Hypothetical protein; identified by GeneMark; putative. | Conserved hypothetical protein; Similar to SP:Q60279 PID:1522657 GB:L77118 SP:Q60279 PID:1522657 percent identity: 28.76; identified by sequence similarity; putative. | 0.773 |
AF_1283 | AF_1284 | Predicted coding region AF_1283; Hypothetical protein; identified by GeneMark; putative. | Thioredoxin (trx-3); Similar to SP:P00275 percent identity: 52.94; identified by sequence similarity; putative. | 0.588 |
AF_1284 | AF_1281 | Thioredoxin (trx-3); Similar to SP:P00275 percent identity: 52.94; identified by sequence similarity; putative. | Intracellular protease (pfpI); Similar to PID:1373331 percent identity: 56.02; identified by sequence similarity; putative; Belongs to the peptidase C56 family. | 0.584 |
AF_1284 | AF_1282 | Thioredoxin (trx-3); Similar to SP:P00275 percent identity: 52.94; identified by sequence similarity; putative. | Conserved hypothetical protein; Similar to SP:Q60279 PID:1522657 GB:L77118 SP:Q60279 PID:1522657 percent identity: 28.76; identified by sequence similarity; putative. | 0.588 |
AF_1284 | AF_1283 | Thioredoxin (trx-3); Similar to SP:P00275 percent identity: 52.94; identified by sequence similarity; putative. | Predicted coding region AF_1283; Hypothetical protein; identified by GeneMark; putative. | 0.588 |