Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AF_1283Predicted coding region AF_1283; Hypothetical protein; identified by GeneMark; putative. (100 aa)    
Predicted Functional Partners:
AF_1282
Conserved hypothetical protein; Similar to SP:Q60279 PID:1522657 GB:L77118 SP:Q60279 PID:1522657 percent identity: 28.76; identified by sequence similarity; putative.
       0.773
AF_1284
Thioredoxin (trx-3); Similar to SP:P00275 percent identity: 52.94; identified by sequence similarity; putative.
       0.588
AF_1281
Intracellular protease (pfpI); Similar to PID:1373331 percent identity: 56.02; identified by sequence similarity; putative; Belongs to the peptidase C56 family.
       0.572
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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