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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1300ABC transporter, ATP-binding protein; Similar to PID:1163122 percent identity: 34.13; identified by sequence similarity; putative. (303 aa)    
Predicted Functional Partners:
AF_1005
ABC transporter, ATP-binding protein, putative; Similar to SP:P37624 PID:912462 PID:2367231 percent identity: 26.69; identified by sequence similarity; putative.
  
 0.958
AF_1301
Predicted coding region AF_1301; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.874
AF_1137
Predicted coding region AF_1137; Hypothetical protein; identified by GeneMark; putative.
  
 
 0.870
AF_1302
Conserved hypothetical protein; Similar to GP:1786320 percent identity: 23.12; identified by sequence similarity; putative.
 
  
 0.854
AF_1883
Daunorubicin resistance membrane protein (drrB); Similar to GB:M73758 SP:P32011 GB:L37338 PID:153231 percent identity: 27.04; identified by sequence similarity; putative.
  
 0.760
AF_0144
Cytochrome C oxidase, subunit II (cbaB); Similar to GB:L09121 PID:155085 SP:P98052 percent identity: 34.18; identified by sequence similarity; putative.
  
 
 0.722
AF_1471
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58119 PID:1591425 percent identity: 38.96; identified by sequence similarity; putative.
  
  
 0.613
tfb
Transcription initiation factor IIB; Stabilizes TBP binding to an archaeal box-A promoter. Also responsible for recruiting RNA polymerase II to the pre-initiation complex (DNA-TBP-TFIIB).
   
 
 0.589
AF_0823
Branched-chain amino acid ABC transporter, ATP-binding protein (braG-2); Similar to GB:J05516 SP:P22730 PID:146635 PID:466591 GB:U00096 percent identity: 42.51; identified by sequence similarity; putative.
    
0.564
rpl14
LSU ribosomal protein L14P (rpl14P); Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.
 
 
   0.509
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.