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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1312Conserved hypothetical protein; Similar to GB:L77117 SP:Q58100 PID:1592301 percent identity: 40.30; identified by sequence similarity; putative. (338 aa)    
Predicted Functional Partners:
AF_1018
ABC transporter, ATP-binding protein; Similar to GB:L77117 SP:Q58206 PID:1591493 percent identity: 57.71; identified by sequence similarity; putative.
   
 
 0.797
AF_1469
ABC transporter, ATP-binding protein; Similar to GB:L77117 SP:Q58206 PID:1591493 percent identity: 59.46; identified by sequence similarity; putative.
   
 
 0.797
AF_1819
ABC transporter, ATP-binding protein; Similar to GB:L77117 SP:Q58206 PID:1591493 percent identity: 51.13; identified by sequence similarity; putative.
   
 
 0.797
AF_1313
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57756 PID:1499092 percent identity: 21.60; identified by sequence similarity; putative.
       0.565
trpCD
Anthranilate synthase component II (trpD); Bifunctional enzyme that catalyzes the second and fourth steps of tryptophan biosynthetic pathway. The second step is catalyzed by the anthranilate phosphoribosyltransferase, coded by the TrpD domain and the fourth step is catalyzed by indole-3-glycerol phosphate synthase, coded by the TrpC domain (By similarity).
       0.550
AF_2090-N
Conserved hypothetical protein; Similar to GB:L77117 PID:1592043 percent identity: 48.59; identified by sequence similarity; putative.
 
    0.516
AF_0429
Methyltransferase; Similar to GB:L77117 SP:Q57551 PID:1498850 percent identity: 43.84; identified by sequence similarity; putative.
  
     0.439
AF_0582
Predicted coding region AF_0582; Hypothetical protein; identified by GeneMark; putative.
  
     0.409
AF_2286
Geranylgeranyl diphosphate synthase, type I; Similar to PID:913252 SP:Q53479 percent identity: 42.68; identified by sequence similarity; putative; Belongs to the FPP/GGPP synthase family.
 
  
 0.403
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.