STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1322Conserved hypothetical protein; Similar to GB:L77117 PID:1591634 percent identity: 33.23; identified by sequence similarity; putative. (501 aa)    
Predicted Functional Partners:
pyrH
Uridylate kinase (pyrH); Catalyzes the reversible phosphorylation of UMP to UDP.
 
  
 0.844
AF_1321
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58873 PID:1592117 percent identity: 40.07; identified by sequence similarity; putative.
 
   
 0.830
lysS
lysyl-tRNA synthetase (lysS); Similar to GB:L77117 SP:Q57959 PID:1591243 percent identity: 43.60; identified by sequence similarity; putative; Belongs to the class-I aminoacyl-tRNA synthetase family.
 
     0.753
AF_0707
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58767 PID:1592017 percent identity: 43.83; identified by sequence similarity; putative.
 
  
 0.701
AF_1791
Signal sequence peptidase (sec11); Similar to GB:Z47047 SP:P15367 PID:4433 PID:557828 PID:763367 percent identity: 36.30; identified by sequence similarity; putative.
 
  
 0.700
cutA
Periplasmic divalent cation tolerance protein (cutA); Involved in resistance toward heavy metals.
       0.657
AF_1217
Conserved hypothetical protein; Similar to GB:L77117 SP:Q60332 PID:1498780 percent identity: 39.94; identified by sequence similarity; putative.
 
     0.652
uppS
Conserved hypothetical protein; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with geranylgeranyl diphosphate (GGPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30E,34E,38E)-undecaprenyl diphosphate (tritrans,heptacis-UPP). It is probably the precursor of glycosyl carrier lipids.
  
  
 0.650
AF_0780
Predicted coding region AF_0780; Hypothetical protein; identified by GeneMark; putative.
  
     0.648
AF_0735
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58387 PID:1591640 percent identity: 36.87; identified by sequence similarity; putative.
 
    0.626
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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