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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1382Predicted coding region AF_1382; Hypothetical protein; identified by GeneMark; putative. (95 aa)    
Predicted Functional Partners:
rio2
Conserved hypothetical protein; Similar to GB:L77117 PID:1499920 percent identity: 33.59; identified by sequence similarity; putative.
      
 0.867
AF_1378
F420-nonreducing hydrogenase (vhtD-2); Similar to PID:1016350 percent identity: 33.11; identified by sequence similarity; putative.
       0.516
AF_1379
Quinone-reactive Ni/Fe-hydrogenase B-type cytochrome subunit (hydC); Similar to SP:P31875 PID:48518 percent identity: 29.03; identified by sequence similarity; putative.
       0.514
AF_1380
F420-nonreducing hydrogenase (vhtA); Similar to PID:602583 percent identity: 34.82; identified by sequence similarity; putative.
       0.513
AF_1381
F420-nonreducing hydrogenase (vhtG); Similar to PID:602582 percent identity: 46.11; identified by sequence similarity; putative.
       0.513
AF_1383
ISA0963-4, putative transposase; Similar to GP:1143021 percent identity: 33.52; identified by sequence similarity; putative.
       0.489
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.