STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1392Branched-chain amino acid ABC transporter, permease protein (braD-4); Similar to GB:L77117 PID:1591904 percent identity: 65.44; identified by sequence similarity; putative. (312 aa)    
Predicted Functional Partners:
AF_1393
Branched-chain amino acid ABC transporter, permease protein (braE-4); Similar to GB:L77117 PID:1591905 percent identity: 60.53; identified by sequence similarity; putative.
 
 
 0.998
livG
Branched-chain amino acid ABC transporter, ATP-binding protein (braF-4) {Methanococcus jannasch; Probable component of a branched-chain amino-acid transport system.
 
 
 0.994
livF
Branched-chain amino acid ABC transporter, ATP-binding protein (braG-4) {Methanococcus jannasch; Probable component of a branched-chain amino-acid transport system.
 
 
 0.984
AF_0225
Branched-chain amino acid ABC transporter, permease protein (braE-1); Similar to PID:146634 percent identity: 28.72; identified by sequence similarity; putative.
 
 0.975
AF_0823
Branched-chain amino acid ABC transporter, ATP-binding protein (braG-2); Similar to GB:J05516 SP:P22730 PID:146635 PID:466591 GB:U00096 percent identity: 42.51; identified by sequence similarity; putative.
 
 
 0.970
AF_0222
Branched-chain amino acid ABC transporter, ATP-binding protein (braF-1); Similar to GB:J05516 SP:P22730 PID:146635 PID:466591 GB:U00096 percent identity: 41.59; identified by sequence similarity; putative.
 
 
 0.968
AF_1391
Branched-chain amino acid ABC transporter, periplasmic binding protein (braC-4); Similar to GB:L77117 PID:1591901 percent identity: 50.12; identified by sequence similarity; putative.
 
  
 0.966
AF_0960
Branched-chain amino acid ABC transporter, permease protein (braE-3); Similar to GB:D12589 SP:P30296 PID:217073 percent identity: 30.12; identified by sequence similarity; putative.
 
 
 0.961
AF_0221
Branched-chain amino acid ABC transporter, ATP-binding protein (braG-1); Similar to GB:U00039 SP:P22731 PID:146636 PID:912456 GB:U00096 percent identity: 48.23; identified by sequence similarity; putative.
 
 
 0.959
AF_0822
Branched-chain amino acid ABC transporter, ATP-binding protein (braF-2); Similar to GB:U00039 SP:P22731 PID:146636 PID:912456 GB:U00096 percent identity: 44.73; identified by sequence similarity; putative.
 
 
 0.959
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.