Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AF_1395Conserved hypothetical protein; Similar to GB:L77117 PID:1592047 percent identity: 45.41; identified by sequence similarity; putative; In the N-terminal section; belongs to the UPF0200 family. (323 aa)    
Predicted Functional Partners:
AF_2318
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57666 PID:1498989 percent identity: 38.13; identified by sequence similarity; putative.
  
   
 0.887
AF_1393
Branched-chain amino acid ABC transporter, permease protein (braE-4); Similar to GB:L77117 PID:1591905 percent identity: 60.53; identified by sequence similarity; putative.
 
     0.807
AF_1396
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58217 PID:1591499 percent identity: 44.68; identified by sequence similarity; putative.
     
 0.806
AF_1392
Branched-chain amino acid ABC transporter, permease protein (braD-4); Similar to GB:L77117 PID:1591904 percent identity: 65.44; identified by sequence similarity; putative.
 
     0.803
AF_1394
Predicted coding region AF_1394; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_0927
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57662 PID:1498984 percent identity: 47.83; identified by sequence similarity; putative.
 
     0.753
pyrB
Aspartate carbamoyltransferase, catalytic subunit (pyrB); Similar to GB:L77117 PID:1500476 percent identity: 60.74; identified by sequence similarity; putative.
  
  
 0.682
rnhB
Ribonuclease HII (rnhB); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
    0.628
AF_1279
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58707 PID:1591950 percent identity: 30.05; identified by sequence similarity; putative.
       0.624
AF_1391
Branched-chain amino acid ABC transporter, periplasmic binding protein (braC-4); Similar to GB:L77117 PID:1591901 percent identity: 50.12; identified by sequence similarity; putative.
 
     0.623
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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