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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1395Conserved hypothetical protein; Similar to GB:L77117 PID:1592047 percent identity: 45.41; identified by sequence similarity; putative; In the N-terminal section; belongs to the UPF0200 family. (323 aa)    
Predicted Functional Partners:
AF_2318
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57666 PID:1498989 percent identity: 38.13; identified by sequence similarity; putative.
  
   
 0.919
AF_1396
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58217 PID:1591499 percent identity: 44.68; identified by sequence similarity; putative.
     
 0.810
AF_1393
Branched-chain amino acid ABC transporter, permease protein (braE-4); Similar to GB:L77117 PID:1591905 percent identity: 60.53; identified by sequence similarity; putative.
 
     0.808
AF_1392
Branched-chain amino acid ABC transporter, permease protein (braD-4); Similar to GB:L77117 PID:1591904 percent identity: 65.44; identified by sequence similarity; putative.
 
     0.804
AF_1394
Predicted coding region AF_1394; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_0936
Conserved hypothetical protein; Similar to GB:L77117 PID:1591577 percent identity: 29.60; identified by sequence similarity; putative.
  
  
 0.709
rnhB
Ribonuclease HII (rnhB); Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
  
    0.705
nth
Endonuclease III (nth); DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.
  
    0.656
AF_0972
DNA polymerase III, subunit epsilon (dnaQ); Similar to GB:K00985 SP:P03007 GB:X04027 PID:1208975 PID:147679 percent identity: 31.90; identified by sequence similarity; putative.
     
 0.644
AF_1251
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57570 PID:1590883 percent identity: 38.16; identified by sequence similarity; putative.
 
     0.643
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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