Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1398Predicted coding region AF_1398; Hypothetical protein; identified by GeneMark; putative. (806 aa)    
Predicted Functional Partners:
AF_1399
Conserved hypothetical protein; Similar to SP:P42110 SP:P42111 PID:563945 PID:904175 PID:904190 percent identity: 34.01; identified by sequence similarity; putative.
       0.775
AF_1401
Iron (III) ABC transporter, ATP-binding protein (hemV-3); Similar to GB:L77117 PID:1591556 percent identity: 35.19; identified by sequence similarity; putative.
  
    0.652
AF_1402
Iron (III) ABC transporter, permease protein (hemU-2); Similar to GB:L42023 PID:1007599 PID:1221614 PID:1205706 SP:Q57130 percent identity: 35.22; identified by sequence similarity; putative.
  
    0.567
AF_2302
Predicted coding region AF_2302; Hypothetical protein; identified by GeneMark; putative.
   
    0.558
AF_1400
Conserved hypothetical protein; Similar to GB:L77117 PID:1500511 percent identity: 32.53; identified by sequence similarity; putative.
       0.551
AF_1170
Ribose ABC transporter, ATP-binding protein (rbsA-2); Similar to GP:1894759 percent identity: 27.94; identified by sequence similarity; putative.
 
    0.547
AF_1403
Conserved hypothetical protein; Similar to GB:L77117 PID:1592100 percent identity: 58.99; identified by sequence similarity; putative.
       0.515
AF_1404
Transcriptional regulatory protein, AsnC family; Similar to GB:L10328 SP:P03809 GB:K00826 PID:290592 PID:455179 percent identity: 45.10; identified by sequence similarity; putative.
       0.515
AF_1405
Conserved hypothetical protein; Similar to GB:L77117 PID:1592081 percent identity: 46.05; identified by sequence similarity; putative.
       0.461
AF_1841
Cobalt transport ATP-binding protein (cbiO-2); Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
  
    0.449
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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