STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1443Conserved hypothetical protein; Similar to GB:L77117 PID:1592003 percent identity: 40.93; identified by sequence similarity; putative. (248 aa)    
Predicted Functional Partners:
AF_0518
Conserved hypothetical protein; Similar to GB:L77117 PID:1592003 percent identity: 34.55; identified by sequence similarity; putative.
  
     0.674
fbp
Conserved hypothetical protein; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).
 
     0.624
gatE
Glu-tRNA amidotransferase, subunit B (gatB-1); Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). The GatDE system is specific for glutamate and does not act on aspartate.
       0.559
AF_1441
Predicted coding region AF_1441; Hypothetical protein; identified by GeneMark; putative.
       0.559
AF_1484
Predicted coding region AF_1484; Hypothetical protein; identified by GeneMark; putative.
  
     0.536
AF_1438
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58075 PID:1591374 percent identity: 43.66; identified by sequence similarity; putative.
       0.493
AF_1439
Asparagine synthetase (asnB); Similar to GB:L77117 SP:Q58516 PID:1591755 percent identity: 36.88; identified by sequence similarity; putative.
       0.493
AF_1050
Conserved hypothetical protein; Similar to GB:L77117 PID:1591574 percent identity: 29.44; identified by sequence similarity; putative.
 
     0.480
AF_1436
Iron-sulfur flavoprotein (isf-1); Redox-active protein probably involved in electron transport. Belongs to the SsuE family. Isf subfamily.
       0.460
AF_1437
Predicted coding region AF_1437; Hypothetical protein; identified by GeneMark; putative.
       0.460
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.