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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1448Transcriptional regulatory protein, AsnC family; Similar to GB:L77117 SP:Q58133 PID:1591440 percent identity: 30.58; identified by sequence similarity; putative. (187 aa)    
Predicted Functional Partners:
copA
Cation-transporting ATPase, P-type (pacS); Probably involved in copper and silver export.
     
 0.789
AF_1449
Pyruvate formate-lyase 2 (pflD); Similar to SP:P32674 GB:U00006 PID:396298 GB:U00096 PID:1790388 percent identity: 37.81; identified by sequence similarity; putative.
       0.662
AF_1450
Pyruvate formate-lyase 2 activating enzyme (pflC); Similar to SP:P32675 PID:396299 GB:U00096 PID:1790389 percent identity: 38.77; identified by sequence similarity; putative.
       0.661
AF_1446
Predicted coding region AF_1446; Hypothetical protein; identified by GeneMark; putative.
       0.508
AF_1447
Predicted coding region AF_1447; Hypothetical protein; identified by GeneMark; putative.
       0.508
AF_0474
Transcriptional regulatory protein, AsnC family; Similar to SP:P42180 percent identity: 36.84; identified by sequence similarity; putative.
  
     0.504
AF_1148
Transcriptional regulatory protein, AsnC family; Similar to GB:L77117 SP:Q57615 PID:1498922 percent identity: 32.62; identified by sequence similarity; putative.
  
   
 0.474
thsB
Thermosome, subunit beta (thsB); Molecular chaperone; binds unfolded polypeptides in vitro, and has a weak ATPase activity; Belongs to the TCP-1 chaperonin family.
     
 0.473
AF_1452
Signal-transducing histidine kinase; Similar to GB:M29450 SP:P16497 GB:M31067 PID:143333 PID:143631 percent identity: 26.63; identified by sequence similarity; putative.
 
   
 0.458
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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