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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1474Predicted coding region AF_1474; Hypothetical protein; identified by GeneMark; putative. (448 aa)    
Predicted Functional Partners:
tspO
Mitochondrial benzodiazepine receptor/sensory transduction protein; Binds tetrapyrroles and promotes the photooxidative degradation of protoporphyrin IX. May play a role in the transmembrane transport of tetrapyrroles and similar compounds (By similarity); Belongs to the TspO/BZRP family.
       0.773
AF_1476
Conserved hypothetical protein; Similar to GB:L04283 SP:Q02481 PID:152720 percent identity: 33.90; identified by sequence similarity; putative.
       0.541
AF_1472
Signal-transducing histidine kinase; Similar to PID:1652120 percent identity: 30.40; identified by sequence similarity; putative.
       0.529
AF_1473
Response regulator; Similar to PID:1086465 percent identity: 38.64; identified by sequence similarity; putative.
       0.529
AF_1477
Predicted coding region AF_1477; Hypothetical protein; identified by GeneMark; putative.
       0.472
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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