STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1476Conserved hypothetical protein; Similar to GB:L04283 SP:Q02481 PID:152720 percent identity: 33.90; identified by sequence similarity; putative. (177 aa)    
Predicted Functional Partners:
AF_1477
Predicted coding region AF_1477; Hypothetical protein; identified by GeneMark; putative.
 
     0.712
AF_1830
F420H2:quinone oxidoreductase, 45 kDa subunit (nuoD); Similar to PIR:S45666 percent identity: 80.00; identified by sequence similarity; putative.
  
  
 0.689
AF_0683
Succinate dehydrogenase, subunit C (sdhC); Similar to GP:1524299 percent identity: 36.56; identified by sequence similarity; putative.
  
  
 0.688
AF_1039
Conserved hypothetical protein; Similar to GB:M20144 SP:P40403 PID:289302 GB:AL009126 percent identity: 26.56; identified by sequence similarity; putative.
    
   0.678
tspO
Mitochondrial benzodiazepine receptor/sensory transduction protein; Binds tetrapyrroles and promotes the photooxidative degradation of protoporphyrin IX. May play a role in the transmembrane transport of tetrapyrroles and similar compounds (By similarity); Belongs to the TspO/BZRP family.
  
    0.619
AF_0131
NAD(P)H-flavin oxidoreductase, putative; Similar to GB:L42023 PID:1007227 PID:1221408 PID:1205518 SP:Q57431 percent identity: 28.16; identified by sequence similarity; putative.
  
  
 0.613
AF_0226
NADH oxidase (noxC); Similar to GB:X60110 GB:S55441 PID:48247 PID:265804 percent identity: 38.36; identified by sequence similarity; putative.
  
  
 0.613
AF_2267
NAD(P)H-flavin oxidoreductase; Similar to GB:L42023 PID:1007227 PID:1221408 PID:1205518 SP:Q57431 percent identity: 31.37; identified by sequence similarity; putative.
  
  
 0.613
AF_2430
lacZ expression regulatory protein (icc); Similar to GB:D16557 SP:P36650 PID:453396 PID:882562 GB:U00096 percent identity: 29.55; identified by sequence similarity; putative.
  
  
 0.602
AF_1474
Predicted coding region AF_1474; Hypothetical protein; identified by GeneMark; putative.
       0.541
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.