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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1484Predicted coding region AF_1484; Hypothetical protein; identified by GeneMark; putative. (53 aa)    
Predicted Functional Partners:
AF_1483
Signal-transducing histidine kinase; Similar to PID:1652120 percent identity: 27.72; identified by sequence similarity; putative.
       0.773
AF_0354
Conserved hypothetical protein; Similar to PID:1653695 percent identity: 26.90; identified by sequence similarity; putative.
 
     0.664
AF_0775
Conserved hypothetical protein; Similar to GB:L77117 PID:1591574 percent identity: 23.83; identified by sequence similarity; putative.
  
     0.635
AF_0452
Conserved hypothetical protein; Similar to PID:1653695 percent identity: 29.42; identified by sequence similarity; putative.
  
     0.626
AF_0351
Conserved hypothetical protein; Similar to GB:L77117 PID:1592003 percent identity: 33.33; identified by sequence similarity; putative.
 
     0.565
tgt
Queuine tRNA-ribosyltransferase (tgtB); Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to [...]
       0.550
AF_1443
Conserved hypothetical protein; Similar to GB:L77117 PID:1592003 percent identity: 40.93; identified by sequence similarity; putative.
  
     0.536
AF_0518
Conserved hypothetical protein; Similar to GB:L77117 PID:1592003 percent identity: 34.55; identified by sequence similarity; putative.
  
     0.522
AF_1050
Conserved hypothetical protein; Similar to GB:L77117 PID:1591574 percent identity: 29.44; identified by sequence similarity; putative.
 
     0.471
AF_1480
Conserved hypothetical protein; Similar to GP:1707702 percent identity: 41.03; identified by sequence similarity; putative.
       0.448
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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