Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1544Transcriptional regulatory protein, ArsR family; Similar to SP:P30346 GB:X65467 PID:47183 percent identity: 32.26; identified by sequence similarity; putative. (131 aa)    
Predicted Functional Partners:
AF_1543
Predicted coding region AF_1543; Hypothetical protein; identified by GeneMark; putative.
       0.773
AF_1542
Conserved hypothetical protein; Similar to GB:X69895 SP:P39044 PID:40067 percent identity: 29.13; identified by sequence similarity; putative.
  
  
 0.587
AF_1546
Conserved hypothetical protein; Similar to SP:P11666 PID:41424 PID:882453 GB:U00096 PID:1789291 percent identity: 33.47; identified by sequence similarity; putative.
     
 0.559
AF_1541
Conserved hypothetical protein; Similar to GP:1449355 percent identity: 42.59; identified by sequence similarity; putative.
     
 0.551
AF_1545
Predicted coding region AF_1545; Hypothetical protein; identified by GeneMark; putative.
       0.533
AF_1547
Conserved hypothetical protein; Similar to SP:P46227 PID:666972 percent identity: 36.59; identified by sequence similarity; putative.
       0.533
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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