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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1544Transcriptional regulatory protein, ArsR family; Similar to SP:P30346 GB:X65467 PID:47183 percent identity: 32.26; identified by sequence similarity; putative. (131 aa)    
Predicted Functional Partners:
AF_1543
Predicted coding region AF_1543; Hypothetical protein; identified by GeneMark; putative.
       0.774
AF_1542
Conserved hypothetical protein; Similar to GB:X69895 SP:P39044 PID:40067 percent identity: 29.13; identified by sequence similarity; putative.
  
  
 0.603
AF_1541
Conserved hypothetical protein; Similar to GP:1449355 percent identity: 42.59; identified by sequence similarity; putative.
     
 0.553
AF_1546
Conserved hypothetical protein; Similar to SP:P11666 PID:41424 PID:882453 GB:U00096 PID:1789291 percent identity: 33.47; identified by sequence similarity; putative.
     
 0.548
AF_1545
Predicted coding region AF_1545; Hypothetical protein; identified by GeneMark; putative.
       0.533
AF_1547
Conserved hypothetical protein; Similar to SP:P46227 PID:666972 percent identity: 36.59; identified by sequence similarity; putative.
       0.533
AF_2430
lacZ expression regulatory protein (icc); Similar to GB:D16557 SP:P36650 PID:453396 PID:882562 GB:U00096 percent identity: 29.55; identified by sequence similarity; putative.
  
  
 0.484
copA
Cation-transporting ATPase, P-type (pacS); Probably involved in copper and silver export.
  
  
 0.411
copB
Copper-transporting ATPase, P-type (copB); Involved in copper export; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
  
  
 0.401
AF_0191
Predicted coding region AF_0191; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.401
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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