Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1546Conserved hypothetical protein; Similar to SP:P11666 PID:41424 PID:882453 GB:U00096 PID:1789291 percent identity: 33.47; identified by sequence similarity; putative. (283 aa)    
Predicted Functional Partners:
AF_1545
Predicted coding region AF_1545; Hypothetical protein; identified by GeneMark; putative.
       0.906
AF_1547
Conserved hypothetical protein; Similar to SP:P46227 PID:666972 percent identity: 36.59; identified by sequence similarity; putative.
       0.773
AF_0860
Predicted coding region AF_0860; Hypothetical protein; identified by GeneMark; putative.
   
    0.738
AF_1972
Conserved hypothetical protein; Similar to GB:L77117 PID:1500551 percent identity: 30.07; identified by sequence similarity; putative.
   
    0.738
AF_1784
Protoporphyrinogen oxidase (hemK); Putative protein methyltransferase using S-adenosyl-L- methionine as the methyl donor. May methylate a Gln residue in target proteins (By similarity); Belongs to the eukaryotic/archaeal PrmC-related family.
     
 0.609
AF_1544
Transcriptional regulatory protein, ArsR family; Similar to SP:P30346 GB:X65467 PID:47183 percent identity: 32.26; identified by sequence similarity; putative.
     
 0.559
AF_1543
Predicted coding region AF_1543; Hypothetical protein; identified by GeneMark; putative.
       0.537
AF_0218
TRK potassium uptake system protein (trkA-1); Similar to GB:X74307 SP:P39449 PID:414170 percent identity: 30.17; identified by sequence similarity; putative.
     
 0.514
AF_2430
lacZ expression regulatory protein (icc); Similar to GB:D16557 SP:P36650 PID:453396 PID:882562 GB:U00096 percent identity: 29.55; identified by sequence similarity; putative.
 
  
 0.505
AF_1548
Predicted coding region AF_1548; Hypothetical protein; identified by GeneMark; putative.
       0.494
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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