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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1606Spermidine/putrescine ABC transporter, permease protein (potC); Similar to GB:M64519 SP:P23859 PID:147328 GB:U00096 PID:1651551 percent identity: 39.48; identified by sequence similarity; putative. (242 aa)    
Predicted Functional Partners:
AF_1607
Spermidine/putrescine ABC transporter, permease protein (potB); Similar to GB:L42023 SP:P45170 PID:1007357 PID:1221478 PID:1205582 percent identity: 38.00; identified by sequence similarity; putative.
 
0.999
AF_1608
Spermidine/putrescine ABC transporter, ATP-binding protein (potA); Similar to GB:M64519 SP:P23858 PID:147326 GB:U00096 PID:1651555 percent identity: 50.16; identified by sequence similarity; putative.
 
 0.989
speH
Conserved hypothetical protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
  
  
 0.593
proS
prolyl-tRNA synthetase (proS); Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).
       0.572
AF_2430
lacZ expression regulatory protein (icc); Similar to GB:D16557 SP:P36650 PID:453396 PID:882562 GB:U00096 percent identity: 29.55; identified by sequence similarity; putative.
       0.572
AF_0731
Cobalt transport ATP-binding protein (cbiO-1); Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
   
  
 0.542
AF_1841
Cobalt transport ATP-binding protein (cbiO-2); Probably part of an ABC transporter complex. Responsible for energy coupling to the transport system (By similarity).
   
  
 0.542
wtpB
Sulfate ABC transporter, permease protein (cysT); Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Probably responsible for the translocation of the substrate across the membrane (Probable); Belongs to the binding-protein-dependent transport system permease family.
 
    0.524
wtpC
Sulfate ABC transporter, ATP-binding protein (cysA); Part of the ABC transporter complex WtpABC involved in molybdate/tungstate import. Responsible for energy coupling to the transport system (Probable).
  
     0.507
AF_1170
Ribose ABC transporter, ATP-binding protein (rbsA-2); Similar to GP:1894759 percent identity: 27.94; identified by sequence similarity; putative.
   
  
 0.501
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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