Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1622Leucine responsive regulatory protein (lrp); Similar to GP:1262197 percent identity: 29.05; identified by sequence similarity; putative. (163 aa)    
Predicted Functional Partners:
AF_1623
Aspartate aminotransferase (aspB-3); Similar to GB:L77117 SP:Q60317 PID:1592252 percent identity: 39.41; identified by sequence similarity; putative.
 
   
 0.928
AF_1624
Molybdopterin converting factor, subunit 1 (moaD); Similar to SP:P30748 PID:42011 GB:U00096 PID:1651357 PID:1787002 percent identity: 36.59; identified by sequence similarity; putative.
       0.773
rps8e
SSU ribosomal protein S8E (rps8E); Similar to GB:L77117 SP:P54055 PID:1591387 percent identity: 61.60; identified by sequence similarity; putative.
       0.619
AF_1625
Predicted coding region AF_1625; Hypothetical protein; identified by GeneMark; putative.
       0.566
AF_1621
Conserved hypothetical protein; Similar to SP:P33019 PID:405879 GB:U00096 PID:1788482 percent identity: 29.15; identified by sequence similarity; putative.
       0.553
AF_1620
Signal-transducing histidine kinase, putative; Similar to PID:1652841 percent identity: 26.18; identified by sequence similarity; putative.
       0.552
cdc6-1
Cell division control protein 6, putative; Involved in regulation of DNA replication.
       0.489
AF_0651
Predicted coding region AF_0651; Hypothetical protein; identified by GeneMark; putative.
   
 
 0.458
AF_1404
Transcriptional regulatory protein, AsnC family; Similar to GB:L10328 SP:P03809 GB:K00826 PID:290592 PID:455179 percent identity: 45.10; identified by sequence similarity; putative.
   
 
 0.458
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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