Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1639Signal-transducing histidine kinase; Similar to SP:P10955 GB:J03174 PID:152215 PID:49404 percent identity: 29.91; identified by sequence similarity; putative. (323 aa)    
Predicted Functional Partners:
AF_2419
Response regulator; Similar to PID:1086465 percent identity: 37.93; identified by sequence similarity; putative.
 
 
 
 0.706
AF_1898
Response regulator; Similar to PID:940149 percent identity: 48.70; identified by sequence similarity; putative.
 
 
 
 0.674
rbcL
Ribulose bisphosphate carboxylase, large subunit (rbcL-2); Catalyzes the addition of molecular CO(2) and H(2)O to ribulose 1,5-bisphosphate (RuBP), generating two molecules of 3- phosphoglycerate (3-PGA). Functions in an archaeal AMP degradation pathway, together with AMP phosphorylase and R15P isomerase. Belongs to the RuBisCO large chain family. Type III subfamily.
       0.671
AF_1256
Response regulator; Similar to PID:940149 percent identity: 42.45; identified by sequence similarity; putative.
 
 
 
 0.667
AF_1384
Response regulator; Similar to PID:940149 percent identity: 44.74; identified by sequence similarity; putative.
 
 
 
 0.658
AF_0449
Response regulator; Similar to GB:M59781 SP:P24072 PID:142682 GB:AL009126 percent identity: 38.14; identified by sequence similarity; putative.
 
 
 
 0.656
AF_2249
Response regulator; Similar to PID:940149 percent identity: 44.83; identified by sequence similarity; putative.
 
 
 
 0.648
AF_1640
Rubrerythrin (rr3); Similar to GB:L77117 SP:Q58144 PID:1591449 percent identity: 37.80; identified by sequence similarity; putative.
       0.615
AF_1637
Bacteriochlorophyll synthase, 43 kDa subunit (chlP-3); Similar to SP:P26172 PID:46117 percent identity: 27.03; identified by sequence similarity; putative.
       0.582
AF_1473
Response regulator; Similar to PID:1086465 percent identity: 38.64; identified by sequence similarity; putative.
 
 
 
 0.568
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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