STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1647Conserved hypothetical protein; Similar to GB:X52543 PID:46506 SP:P55177 percent identity: 26.56; identified by sequence similarity; putative. (258 aa)    
Predicted Functional Partners:
AF_1645
Pantothenate metabolism flavoprotein (dfp); Similar to GB:L77117 PID:1591587 percent identity: 42.42; identified by sequence similarity; putative.
 
  
 0.826
AF_1644
Tungsten formylmethanofuran dehydrogenase, subunit F (fwdF); Similar to GB:L77117 PID:1591792 percent identity: 38.21; identified by sequence similarity; putative.
       0.773
AF_1646
Conserved hypothetical protein; Similar to GB:L77117 PID:1591632 percent identity: 34.23; identified by sequence similarity; putative.
       0.773
AF_1648
Bacteriochlorophyll synthase, 33 kDa subunit; Similar to PID:1001103 PID:1001139 percent identity: 27.92; identified by sequence similarity; putative.
       0.739
AF_1643
Conserved hypothetical protein; Similar to GB:L77117 PID:1499986 percent identity: 43.00; identified by sequence similarity; putative; Belongs to the UbiD family.
     
 0.710
trpCD
Anthranilate synthase component II (trpD); Bifunctional enzyme that catalyzes the second and fourth steps of tryptophan biosynthetic pathway. The second step is catalyzed by the anthranilate phosphoribosyltransferase, coded by the TrpD domain and the fourth step is catalyzed by indole-3-glycerol phosphate synthase, coded by the TrpC domain (By similarity).
  
  
 0.638
AF_1649
Tungsten formylmethanofuran dehydrogenase, subunit G (fwdG); Similar to PID:871460 GB:AE000666 PID:1890208 percent identity: 45.57; identified by sequence similarity; putative.
       0.580
AF_1650
Tungsten formylmethanofuran dehydrogenase, subunit B (fwdB-1); Similar to PID:871464 GB:AE000666 PID:1890212 percent identity: 34.99; identified by sequence similarity; putative.
       0.580
AF_1651
Tungsten formylmethanofuran dehydrogenase, subunit D (fwdD-1); Similar to GP:1881464 percent identity: 32.56; identified by sequence similarity; putative.
       0.580
AF_0646
Agmatinase (speB); Similar to GB:M32363 SP:P16936 PID:147859 PID:551839 PID:882466 percent identity: 33.33; identified by sequence similarity; putative; Belongs to the arginase family.
  
 0.546
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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