Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1673Potassium channel, putative; Similar to PID:1652235 percent identity: 36.27; identified by sequence similarity; putative. (314 aa)    
Predicted Functional Partners:
AF_1672
Acetolactate synthase, small subunit, putative; Similar to PID:1196508 SP:Q59499 percent identity: 29.69; identified by sequence similarity; putative.
       0.773
AF_1671
Coenzyme F390 synthetase (ftsA-2); Similar to PID:1050923 GB:AE000666 percent identity: 29.43; identified by sequence similarity; putative.
       0.762
radA
DNA repair protein RAD51 (radA); Involved in DNA repair and in homologous recombination. Binds and assemble on single-stranded DNA to form a nucleoprotein filament. Hydrolyzes ATP in a ssDNA-dependent manner and promotes DNA strand exchange between homologous DNA molecules (By similarity).
     
 0.621
AF_1670
Adenylylsulfate reductase, subunit A (aprA); Similar to GB:X63435 PID:38809 percent identity: 95.98; identified by sequence similarity; putative.
       0.574
AF_1669
Adenylylsulfate reductase, subunit B (aprB); Similar to GB:X63435 PID:443816 GB:AE000782 percent identity: 100.00; identified by sequence similarity; putative.
       0.542
sat
Sulfate adenylyltransferase (sat); Similar to PID:1653421 percent identity: 28.39; identified by sequence similarity; putative; Belongs to the sulfate adenylyltransferase family.
       0.443
AF_1668
Predicted coding region AF_1668; Hypothetical protein; identified by GeneMark; putative.
       0.443
AF_0717
Conserved hypothetical protein; Similar to GB:D37799 SP:P39760 PID:520844 PID:1377829 GB:AL009126 percent identity: 23.89; identified by sequence similarity; putative.
  
     0.433
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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