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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1686Conserved hypothetical protein; Similar to GB:L77117 SP:Q58774 PID:1592331 percent identity: 40.66; identified by sequence similarity; putative. (100 aa)    
Predicted Functional Partners:
AF_1685
CODH nickel-insertion accessory protein (cooC-2); Similar to GB:L77117 SP:Q58233 PID:1499647 percent identity: 47.37; identified by sequence similarity; putative.
       0.658
AF_1684
Conserved hypothetical protein; Similar to GB:L77117 PID:1591630 percent identity: 41.75; identified by sequence similarity; putative.
       0.605
AF_1687
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57995 PID:1591282 percent identity: 32.45; identified by sequence similarity; putative.
       0.596
AF_1683
Conserved hypothetical protein; Toxic component of a type II toxin-antitoxin (TA) system. An RNase; Belongs to the PINc/VapC protein family.
       0.541
AF_1682
Predicted coding region AF_1682; Hypothetical protein; identified by GeneMark; putative.
       0.538
AF_1710
Type I restriction-modification enzyme, S subunit; Similar to GB:L77117 SP:Q58615 PID:1591847 percent identity: 33.01; identified by sequence similarity; putative.
 
     0.495
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.