Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AF_1708Type I restriction-modification enzyme, R subunit; Similar to GB:L77117 SP:Q57588 PID:1592264 percent identity: 38.95; identified by sequence similarity; putative. (957 aa)    
Predicted Functional Partners:
AF_1710
Type I restriction-modification enzyme, S subunit; Similar to GB:L77117 SP:Q58615 PID:1591847 percent identity: 33.01; identified by sequence similarity; putative.
 
  
 0.991
AF_1707
Predicted coding region AF_1707; Hypothetical protein; identified by GeneMark; putative.
 
   
 0.958
AF_0358
DNA repair protein RAD25; Similar to GB:M31899 SP:P19447 PID:182179 percent identity: 32.49; identified by sequence similarity; putative.
 
  
 0.706
AF_1709
Predicted coding region AF_1709; Hypothetical protein; identified by GeneMark; putative.
       0.540
AF_1706
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid hydrolase (pcbD); Similar to GP:1395174 percent identity: 29.41; identified by sequence similarity; putative.
       0.530
AF_2356
Conserved hypothetical protein; Similar to SP:Q60257 PID:1500679 percent identity: 68.53; identified by sequence similarity; putative; Belongs to the UPF0310 family.
       0.525
AF_1409
Modification methylase, type III R/M system; Similar to SP:P14827 GB:X17111 PID:41315 percent identity: 31.36; identified by sequence similarity; putative.
 
   
 0.434
AF_0296
Conserved hypothetical protein; Similar to GB:L77117 PID:1592247 percent identity: 40.97; identified by sequence similarity; putative.
 
     0.428
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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