STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1708Type I restriction-modification enzyme, R subunit; Similar to GB:L77117 SP:Q57588 PID:1592264 percent identity: 38.95; identified by sequence similarity; putative. (957 aa)    
Predicted Functional Partners:
AF_1710
Type I restriction-modification enzyme, S subunit; Similar to GB:L77117 SP:Q58615 PID:1591847 percent identity: 33.01; identified by sequence similarity; putative.
 
  
 0.996
AF_1707
Predicted coding region AF_1707; Hypothetical protein; identified by GeneMark; putative.
 
   
 0.935
AF_0358
DNA repair protein RAD25; Similar to GB:M31899 SP:P19447 PID:182179 percent identity: 32.49; identified by sequence similarity; putative.
 
  
 0.756
AF_1409
Modification methylase, type III R/M system; Similar to SP:P14827 GB:X17111 PID:41315 percent identity: 31.36; identified by sequence similarity; putative.
 
   
 0.566
AF_1706
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid hydrolase (pcbD); Similar to GP:1395174 percent identity: 29.41; identified by sequence similarity; putative.
       0.542
AF_1709
Predicted coding region AF_1709; Hypothetical protein; identified by GeneMark; putative.
       0.539
AF_2247
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58004 PID:1591292 percent identity: 37.64; identified by sequence similarity; putative.
  
    0.483
AF_0296
Conserved hypothetical protein; Similar to GB:L77117 PID:1592247 percent identity: 40.97; identified by sequence similarity; putative.
 
     0.432
AF_0616
Conserved hypothetical protein; Similar to PID:1652163 percent identity: 28.15; identified by sequence similarity; putative.
     
 0.420
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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