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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1710Type I restriction-modification enzyme, S subunit; Similar to GB:L77117 SP:Q58615 PID:1591847 percent identity: 33.01; identified by sequence similarity; putative. (341 aa)    
Predicted Functional Partners:
AF_1708
Type I restriction-modification enzyme, R subunit; Similar to GB:L77117 SP:Q57588 PID:1592264 percent identity: 38.95; identified by sequence similarity; putative.
 
  
 0.996
AF_1707
Predicted coding region AF_1707; Hypothetical protein; identified by GeneMark; putative.
 
    0.847
AF_1709
Predicted coding region AF_1709; Hypothetical protein; identified by GeneMark; putative.
       0.785
AF_0296
Conserved hypothetical protein; Similar to GB:L77117 PID:1592247 percent identity: 40.97; identified by sequence similarity; putative.
 
     0.567
AF_0358
DNA repair protein RAD25; Similar to GB:M31899 SP:P19447 PID:182179 percent identity: 32.49; identified by sequence similarity; putative.
 
  
 0.539
infB
Translation initiation factor IF-2 (infB); Function in general translation initiation by promoting the binding of the formylmethionine-tRNA to ribosomes. Seems to function along with eIF-2 (By similarity).
   
 
 0.502
AF_1686
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58774 PID:1592331 percent identity: 40.66; identified by sequence similarity; putative.
 
     0.495
AF_2138
Phosphoserine phosphatase (serB); Similar to GB:L77117 PID:1592204 percent identity: 50.71; identified by sequence similarity; putative; Belongs to the HAD-like hydrolase superfamily. SerB family.
  
  
 0.488
AF_1409
Modification methylase, type III R/M system; Similar to SP:P14827 GB:X17111 PID:41315 percent identity: 31.36; identified by sequence similarity; putative.
 
   
 0.430
truB
Centromere/microtubule-binding protein (cbf5); Could be responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 2 subfamily.
  
  
 0.428
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.