Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1753Lysophospholipase; Similar to GP:1763011 percent identity: 33.46; identified by sequence similarity; putative. (266 aa)    
Predicted Functional Partners:
AF_1830
F420H2:quinone oxidoreductase, 45 kDa subunit (nuoD); Similar to PIR:S45666 percent identity: 80.00; identified by sequence similarity; putative.
  
 
 0.875
AF_1829
F420H2:quinone oxidoreductase, 39.7 kDa subunit, putative; Similar to SP:P15602 percent identity: 44.09; identified by sequence similarity; putative.
  
   0.852
AF_1752
Carbohydrate kinase, FGGY family; Similar to GB:M57384 SP:P21939 PID:149607 percent identity: 29.29; identified by sequence similarity; putative; Belongs to the FGGY kinase family.
 
     0.807
AF_1831
F420H2:quinone oxidoreductase, 41.2 kDa subunit, putative; Similar to SP:P06255 percent identity: 34.77; identified by sequence similarity; putative.
   
   0.798
AF_1828
NADH dehydrogenase, subunit 3; Similar to SP:P25707 percent identity: 24.30; identified by sequence similarity; putative.
   
   0.781
apgM1
Phosphonopyruvate decarboxylase (bcpC-2); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family. A-PGAM subfamily.
       0.773
AF_1827
F420H2:quinone oxidoreductase, 43.2 kDa subunit, putative; Similar to PID:882405 SP:P50973 percent identity: 26.99; identified by sequence similarity; putative.
   
   0.748
AF_1755
Conserved hypothetical protein; Similar to GP:1789038 percent identity: 38.07; identified by sequence similarity; putative.
       0.671
AF_1754
Conserved hypothetical protein; Similar to GP:1789039 percent identity: 26.80; identified by sequence similarity; putative; To M.jannaschii MJ1155.1.
       0.648
AF_0065
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58384 PID:1591637 percent identity: 29.77; identified by sequence similarity; putative.
       0.624
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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