Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1767Dipeptide ABC transporter, dipeptide-binding protein (dppA); Similar to GP:1742427 percent identity: 33.12; identified by sequence similarity; putative. (520 aa)    
Predicted Functional Partners:
AF_1768
Dipeptide ABC transporter, permease protein (dppB); Similar to SP:P37316 PID:349226 PID:466682 GB:U00096 PID:1789965 percent identity: 39.34; identified by sequence similarity; putative.
 0.999
AF_1769
Dipeptide ABC transporter, permease protein (dppC); Similar to SP:P37315 PID:349227 PID:466681 GB:U00096 PID:1789964 percent identity: 40.84; identified by sequence similarity; putative.
 
 0.999
AF_1770
Dipeptide ABC transporter, ATP-binding protein (dppD); Similar to SP:P37314 PID:349228 PID:466680 GB:U00096 PID:1789963 percent identity: 47.77; identified by sequence similarity; putative.
 
 0.997
AF_1771
Dipeptide ABC transporter, ATP-binding protein (dppF); Similar to SP:P37313 GB:L08399 PID:466679 PID:349229 GB:U00096 percent identity: 43.13; identified by sequence similarity; putative.
 
 0.997
AF_1766
Amino-acid ABC transporter, periplasmic binding protein/protein kinase; Similar to SP:P54952 PID:1408498 GB:AL009126 percent identity: 27.40; identified by sequence similarity; putative.
  
  
 0.488
korC
2-ketoglutarate ferredoxin oxidoreductase, subunit gamma (korG); Similar to GB:L77117 PID:1591240 percent identity: 40.00; identified by sequence similarity; putative.
  
    0.475
AF_1699
Pyruvate ferredoxin oxidoreductase, subunit gamma (porG); Similar to PID:1197358 percent identity: 50.84; identified by sequence similarity; putative.
  
    0.475
iorB
Indolepyruvate ferredoxin oxidoreductase, subunit beta (iorB); Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.
  
    0.475
AF_2055
2-ketoisovalerate ferredoxin oxidoreductase, subunit gamma (vorG); Similar to PID:1197358 percent identity: 45.21; identified by sequence similarity; putative.
  
    0.475
AF_0432
Iron (III) ABC transporter, ATP-binding protein (hemV-2); Similar to GB:L77117 SP:Q57550 PID:1590868 percent identity: 58.71; identified by sequence similarity; putative.
     
 0.460
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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