Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1771Dipeptide ABC transporter, ATP-binding protein (dppF); Similar to SP:P37313 GB:L08399 PID:466679 PID:349229 GB:U00096 percent identity: 43.13; identified by sequence similarity; putative. (323 aa)    
Predicted Functional Partners:
AF_1768
Dipeptide ABC transporter, permease protein (dppB); Similar to SP:P37316 PID:349226 PID:466682 GB:U00096 PID:1789965 percent identity: 39.34; identified by sequence similarity; putative.
 0.999
AF_1769
Dipeptide ABC transporter, permease protein (dppC); Similar to SP:P37315 PID:349227 PID:466681 GB:U00096 PID:1789964 percent identity: 40.84; identified by sequence similarity; putative.
 0.999
AF_1770
Dipeptide ABC transporter, ATP-binding protein (dppD); Similar to SP:P37314 PID:349228 PID:466680 GB:U00096 PID:1789963 percent identity: 47.77; identified by sequence similarity; putative.
 
0.999
AF_1767
Dipeptide ABC transporter, dipeptide-binding protein (dppA); Similar to GP:1742427 percent identity: 33.12; identified by sequence similarity; putative.
 
 0.997
nadE
NH(3)-dependent NAD+ synthetase (nadE); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.
       0.624
AF_1772
long-chain-fatty-acid--CoA ligase (fadD-7); Similar to SP:P29212 GB:L02649 GB:X70994 PID:581070 GB:U00096 percent identity: 38.67; identified by sequence similarity; putative.
       0.550
AF_0221
Branched-chain amino acid ABC transporter, ATP-binding protein (braG-1); Similar to GB:U00039 SP:P22731 PID:146636 PID:912456 GB:U00096 percent identity: 48.23; identified by sequence similarity; putative.
     
0.522
AF_1139
ABC transporter, ATP-binding protein; Similar to PID:1177253 SP:P55339 PID:2226115 GB:AL009126 percent identity: 38.18; identified by sequence similarity; putative.
    
0.520
AF_0232
Glutamine ABC transporter, permease protein (glnP); Similar to SP:P10345 PID:41572 GB:U00096 PID:1651370 PID:1787030 percent identity: 39.25; identified by sequence similarity; putative.
      0.461
AF_1773
Iron-sulfur binding reductase; Similar to GP:1890198 percent identity: 33.33; identified by sequence similarity; putative.
       0.403
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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