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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1784Protoporphyrinogen oxidase (hemK); Putative protein methyltransferase using S-adenosyl-L- methionine as the methyl donor. May methylate a Gln residue in target proteins (By similarity); Belongs to the eukaryotic/archaeal PrmC-related family. (177 aa)    
Predicted Functional Partners:
prf1
Peptide chain release factor eRF, subunit 1; Directs the termination of nascent peptide synthesis (translation) in response to the termination codons UAA, UAG and UGA.
 
 
 0.943
rsmA
Dimethyladenosine transferase (ksgA); Specifically dimethylates two adjacent adenosines in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits. Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. RsmA subfamily.
     
 0.886
AF_1160
H+-transporting ATP synthase, subunit K (atpK-1); Similar to GB:L77117 SP:Q57674 PID:1590959 percent identity: 46.27; identified by sequence similarity; putative.
 
   0.828
AF_1162
H+-transporting ATP synthase, subunit K (atpK-2); Similar to GB:L77117 SP:Q57674 PID:1590959 percent identity: 46.27; identified by sequence similarity; putative.
 
   0.828
AF_1780
Acetolactate synthase, large subunit (ilvB-2); Similar to GB:L77117 SP:Q57725 PID:1591003 percent identity: 32.06; identified by sequence similarity; putative; Belongs to the TPP enzyme family.
   
 
 0.788
AF_1782
Conserved hypothetical protein; Similar to GB:L77117 PID:1590998 percent identity: 34.72; identified by sequence similarity; putative.
       0.779
AF_1781
Nodulation protein NfeD (nfeD); Similar to PID:1145796 percent identity: 33.41; identified by sequence similarity; putative.
       0.775
AF_1779
2-hydroxyacid dehydrogenase, putative; Similar to GB:L42023 SP:P45250 PID:1007767 PID:1221703 PID:1205791 percent identity: 37.64; identified by sequence similarity; putative; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
       0.751
AF_0781
Conserved hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.
  
  
 0.701
AF_1777
Conserved hypothetical protein; Similar to GB:L42023 PID:1003114 PID:1222018 PID:1204364 SP:Q57354 percent identity: 34.16; identified by sequence similarity; putative.
  
    0.669
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.