Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1810Conserved hypothetical protein; Similar to GB:L77117 SP:Q57567 PID:1498868 percent identity: 43.77; identified by sequence similarity; putative. (259 aa)    
Predicted Functional Partners:
AF_1812
Predicted coding region AF_1812; Hypothetical protein; identified by GeneMark; putative.
       0.787
AF_1811
Inosine monophosphate cyclohydrolase; Similar to SP:P15639 GB:J05126 GB:X51950 PID:147420 PID:396345 percent identity: 38.27; identified by sequence similarity; putative.
       0.773
AF_2226
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57864 PID:1591124 percent identity: 47.67; identified by sequence similarity; putative.
  
     0.636
AF_1020
Predicted coding region AF_1020; Hypothetical protein; identified by GeneMark; putative.
       0.624
AF_1829
F420H2:quinone oxidoreductase, 39.7 kDa subunit, putative; Similar to SP:P15602 percent identity: 44.09; identified by sequence similarity; putative.
       0.592
AF_1830
F420H2:quinone oxidoreductase, 45 kDa subunit (nuoD); Similar to PIR:S45666 percent identity: 80.00; identified by sequence similarity; putative.
       0.584
AF_1809
Predicted coding region AF_1809; Hypothetical protein; identified by GeneMark; putative.
       0.569
pol
DNA polymerase B1 (polB); Similar to PID:807830 percent identity: 45.13; identified by sequence similarity; putative.
   
    0.561
AF_1337
Conserved hypothetical protein; Similar to GB:L77117 PID:1591827 percent identity: 44.02; identified by sequence similarity; putative.
  
     0.525
AF_0350
Conserved hypothetical transmembrane protein; Similar to PID:1652938 percent identity: 34.13; identified by sequence similarity; putative.
  
     0.468
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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