Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AF_1816Predicted coding region AF_1816; Hypothetical protein; identified by GeneMark; putative. (300 aa)    
Predicted Functional Partners:
AF_1815
Acetylornithine aminotransferase (argD-2); Similar to GB:L77117 SP:Q58131 PID:1591438 percent identity: 36.19; identified by sequence similarity; putative.
       0.788
AF_1814
Predicted coding region AF_1814; Hypothetical protein; identified by GeneMark; putative.
       0.651
AF_1817
Transcriptional regulatory protein, TetR family; Similar to PID:868019 GB:U00096 SP:Q59431 PID:1742672 PID:1742680 percent identity: 24.55; identified by sequence similarity; putative.
       0.484
AF_1818
Predicted coding region AF_1818; Hypothetical protein; identified by GeneMark; putative.
       0.484
AF_1819
ABC transporter, ATP-binding protein; Similar to GB:L77117 SP:Q58206 PID:1591493 percent identity: 51.13; identified by sequence similarity; putative.
       0.484
AF_1820
Predicted coding region AF_1820; Hypothetical protein; identified by GeneMark; putative.
       0.484
AF_1813
TBP-interacting protein TIP49; Similar to GP:2225877 percent identity: 47.43; identified by sequence similarity; putative.
       0.471
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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