Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1829F420H2:quinone oxidoreductase, 39.7 kDa subunit, putative; Similar to SP:P15602 percent identity: 44.09; identified by sequence similarity; putative. (353 aa)    
Predicted Functional Partners:
AF_1826
F420H2:quinone oxidoreductase, 72.4 kDa subunit (nuoL); Similar to SP:P31971 PID:154516 percent identity: 33.19; identified by sequence similarity; putative.
 
 
 0.999
AF_1827
F420H2:quinone oxidoreductase, 43.2 kDa subunit, putative; Similar to PID:882405 SP:P50973 percent identity: 26.99; identified by sequence similarity; putative.
 
 0.999
AF_1828
NADH dehydrogenase, subunit 3; Similar to SP:P25707 percent identity: 24.30; identified by sequence similarity; putative.
  
 0.999
AF_1830
F420H2:quinone oxidoreductase, 45 kDa subunit (nuoD); Similar to PIR:S45666 percent identity: 80.00; identified by sequence similarity; putative.
 0.999
AF_1831
F420H2:quinone oxidoreductase, 41.2 kDa subunit, putative; Similar to SP:P06255 percent identity: 34.77; identified by sequence similarity; putative.
 
 0.999
AF_1824
F420H2:quinone oxidoreductase, 11.2 kDa subunit, putative; Similar to SP:P26524 PID:47558 PID:1001392 percent identity: 24.14; identified by sequence similarity; putative.
  
 
 0.997
AF_1823
F420H2:quinone oxidoreductase, 16.5 kDa subunit, putative; Similar to GB:D01014 SP:Q00243 PID:441181 percent identity: 25.68; identified by sequence similarity; putative.
  
 
 0.996
AF_1825
F420H2:quinone oxidoreductase, 53.9 kDa subunit (nuoM); Similar to GP:845186 percent identity: 32.14; identified by sequence similarity; putative.
 
 
 
 0.988
AF_0682
Succinate dehydrogenase, iron-sulfur subunit B (sdhB); Similar to GB:X70908 PID:396212 percent identity: 51.27; identified by sequence similarity; putative.
  
 
 0.930
AF_0142
Cytochrome C oxidase, subunit II, putative; Similar to GB:L09121 PID:155085 SP:P98052 percent identity: 38.04; identified by sequence similarity; putative.
  
 
 0.903
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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