| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AF_1886 | AF_1888 | AF_1886 | AF_1888 | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| AF_1886 | fusA | AF_1886 | AF_1894 | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | Translation elongation factor EF-2 (fus); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity); Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor G [...] | 0.987 |
| AF_1886 | nusA | AF_1886 | AF_1891 | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | Transcription termination-antitermination factor NusA, putative; Participates in transcription termination. Belongs to the NusA family. | 0.994 |
| AF_1886 | rpoA2 | AF_1886 | AF_1889 | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | DNA-directed RNA polymerase, subunit A'' (rpoA2); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| AF_1886 | rpoB1 | AF_1886 | AF_1887 | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | DNA-directed RNA polymerase, subunit B' (rpoB1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. The B (B''+B' and beta) subunits have been implicated in DNA promoter recognition and also in nucleotide binding. | 0.999 |
| AF_1886 | rpoD | AF_1886 | AF_2282 | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | DNA-directed RNA polymerase, subunit D (rpoD); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.992 |
| AF_1886 | rpoH | AF_1886 | AF_1885 | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | DNA-directed RNA polymerase, subunit H (rpoH); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.997 |
| AF_1886 | rpoK | AF_1886 | AF_1131 | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | DNA-directed RNA polymerase, subunit K (rpoK); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.982 |
| AF_1886 | rps12 | AF_1886 | AF_1892 | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | SSU ribosomal protein S12P (rps12P); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.993 |
| AF_1886 | rps7 | AF_1886 | AF_1893 | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | SSU ribosomal protein S7P (rps7P); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. | 0.992 |
| AF_1888 | AF_1886 | AF_1888 | AF_1886 | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, subunit B'' (rpoB2); Similar to SP:P15352 PID:43540 percent identity: 57.14; identified by sequence similarity; putative; Belongs to the RNA polymerase beta chain family. | 0.999 |
| AF_1888 | fusA | AF_1888 | AF_1894 | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Translation elongation factor EF-2 (fus); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome (By similarity); Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor G [...] | 0.993 |
| AF_1888 | nusA | AF_1888 | AF_1891 | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Transcription termination-antitermination factor NusA, putative; Participates in transcription termination. Belongs to the NusA family. | 0.986 |
| AF_1888 | rpoA2 | AF_1888 | AF_1889 | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, subunit A'' (rpoA2); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.999 |
| AF_1888 | rpoB1 | AF_1888 | AF_1887 | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, subunit B' (rpoB1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. The B (B''+B' and beta) subunits have been implicated in DNA promoter recognition and also in nucleotide binding. | 0.999 |
| AF_1888 | rpoD | AF_1888 | AF_2282 | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, subunit D (rpoD); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.996 |
| AF_1888 | rpoH | AF_1888 | AF_1885 | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, subunit H (rpoH); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoH/eukaryotic RPB5 RNA polymerase subunit family. | 0.998 |
| AF_1888 | rpoK | AF_1888 | AF_1131 | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | DNA-directed RNA polymerase, subunit K (rpoK); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal RpoK/eukaryotic RPB6 RNA polymerase subunit family. | 0.993 |
| AF_1888 | rps12 | AF_1888 | AF_1892 | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SSU ribosomal protein S12P (rps12P); With S4 and S5 plays an important role in translational accuracy. Located at the interface of the 30S and 50S subunits. Belongs to the universal ribosomal protein uS12 family. | 0.987 |
| AF_1888 | rps7 | AF_1888 | AF_1893 | DNA-directed RNA polymerase, subunit A' (rpoA1); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | SSU ribosomal protein S7P (rps7P); One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center; Belongs to the universal ribosomal protein uS7 family. | 0.993 |
STRING v12.5 is now available!
