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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_1995Sodium- and chloride-dependent transporter; Similar to GB:L77117 SP:Q58715 PID:1591959 percent identity: 52.49; identified by sequence similarity; putative; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (491 aa)    
Predicted Functional Partners:
AF_1992
Calcium-binding protein, putative; Similar to GP:499141 percent identity: 31.25; identified by sequence similarity; putative.
       0.563
AF_1993
Predicted coding region AF_1993; Hypothetical protein; identified by GeneMark; putative.
       0.563
AF_1994
Predicted coding region AF_1994; Hypothetical protein; identified by GeneMark; putative.
       0.563
trpCD
Anthranilate synthase component II (trpD); Bifunctional enzyme that catalyzes the second and fourth steps of tryptophan biosynthetic pathway. The second step is catalyzed by the anthranilate phosphoribosyltransferase, coded by the TrpD domain and the fourth step is catalyzed by indole-3-glycerol phosphate synthase, coded by the TrpC domain (By similarity).
      
 0.561
AF_1990
Predicted coding region AF_1990; Hypothetical protein; identified by GeneMark; putative.
       0.552
AF_1991
Predicted coding region AF_1991; Hypothetical protein; identified by GeneMark; putative.
       0.552
AF_1069
Pantothenate permease (panF-1); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 28.90; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.510
AF_0015
Proline permease (putP-1); Similar to percent identity: 26.18; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.481
AF_1222
Proline permease (putP-3); Similar to percent identity: 26.97; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.461
AF_0237
Pantothenate permease (panF-3); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 25.11; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.415
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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