Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AF_1995Sodium- and chloride-dependent transporter; Similar to GB:L77117 SP:Q58715 PID:1591959 percent identity: 52.49; identified by sequence similarity; putative; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family. (491 aa)    
Predicted Functional Partners:
AF_2217
methylmalonyl-CoA decarboxylase, subunit alpha (mmdA); Similar to GB:L22208 GB:Z24754 PID:415593 PID:415915 percent identity: 62.52; identified by sequence similarity; putative.
  
    0.607
AF_1992
Calcium-binding protein, putative; Similar to GP:499141 percent identity: 31.25; identified by sequence similarity; putative.
       0.563
AF_1993
Predicted coding region AF_1993; Hypothetical protein; identified by GeneMark; putative.
       0.563
AF_1994
Predicted coding region AF_1994; Hypothetical protein; identified by GeneMark; putative.
       0.563
AF_1990
Predicted coding region AF_1990; Hypothetical protein; identified by GeneMark; putative.
       0.552
AF_1991
Predicted coding region AF_1991; Hypothetical protein; identified by GeneMark; putative.
       0.552
AF_1069
Pantothenate permease (panF-1); Similar to PID:606198 GB:U00096 PID:1789656 percent identity: 28.90; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.476
AF_0015
Proline permease (putP-1); Similar to percent identity: 26.18; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.445
AF_1222
Proline permease (putP-3); Similar to percent identity: 26.97; identified by sequence similarity; putative; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
  
 0.423
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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