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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2099Muconate cycloisomerase II (clcB); Similar to GB:M16964 PID:141917 percent identity: 24.93; identified by sequence similarity; putative. (375 aa)    
Predicted Functional Partners:
AF_2101
Alcohol dehydrogenase, zinc-dependent; Similar to GB:M96947 SP:Q06004 PID:304153 GB:AL009126 percent identity: 30.06; identified by sequence similarity; putative.
 
  
 0.833
AF_1207
2-deoxy-D-gluconate 3-dehydrogenase (kduD); Similar to SP:Q05528 GB:X62073 PID:48986 percent identity: 45.31; identified by sequence similarity; putative.
 
  
 0.679
AF_2100
Acetolactate synthase, large subunit (ilvB-4); Similar to GB:L77117 SP:Q57725 PID:1591003 percent identity: 38.42; identified by sequence similarity; putative; Belongs to the TPP enzyme family.
 
   
 0.664
menB
Dihydroxynaphthoic acid synthase (menB); Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
     
 0.618
dapA
Dihydrodipicolinate synthase (dapA); Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
     
 0.535
AF_1324
Carbohydrate kinase, FGGY family; Similar to SP:P27155 PID:48836 percent identity: 27.10; identified by sequence similarity; putative.
 
   
 0.492
AF_0846
Na+/H+ antiporter (nhe2); Similar to PID:1653577 percent identity: 33.13; identified by sequence similarity; putative.
 
     0.464
AF_0921
Predicted coding region AF_0921; Hypothetical protein; identified by GeneMark; putative.
 
  
 0.456
AF_1521
Conserved hypothetical protein; Removes ADP-ribose from asparatate and glutamate residues in proteins bearing a single ADP-ribose moiety. Inactive towards proteins bearing poly-ADP-ribose. Catalyzes removal of a phosphate group from ADP-ribose 1''-phosphate (Appr1p), but with low efficiency.
     
 0.455
AF_0091
2-hydroxyhepta-2,4-diene-1,7-dioate isomerase (hpcE-1); Similar to GB:L77117 PID:1500558 percent identity: 44.51; identified by sequence similarity; putative.
 
  
 0.450
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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