STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2136Transcriptional regulatory protein, ArsR family; Similar to GB:L77117 SP:Q58948 PID:1500446 percent identity: 39.82; identified by sequence similarity; putative. (179 aa)    
Predicted Functional Partners:
AF_2135
Predicted coding region AF_2135; Hypothetical protein; identified by GeneMark; putative.
       0.701
AF_2134
Predicted coding region AF_2134; Hypothetical protein; identified by GeneMark; putative.
       0.548
AF_2430
lacZ expression regulatory protein (icc); Similar to GB:D16557 SP:P36650 PID:453396 PID:882562 GB:U00096 percent identity: 29.55; identified by sequence similarity; putative.
  
  
 0.484
AF_2308
Arsenite transport protein (arsB); Similar to SP:P08691 GB:J02591 SP:P37310 GB:X80057 PID:151858 percent identity: 24.66; identified by sequence similarity; putative.
 
  
 0.471
copA
Cation-transporting ATPase, P-type (pacS); Probably involved in copper and silver export.
  
  
 0.411
AF_2133
Predicted coding region AF_2133; Hypothetical protein; identified by GeneMark; putative.
       0.406
copB
Copper-transporting ATPase, P-type (copB); Involved in copper export; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IB subfamily.
  
  
 0.401
AF_0191
Predicted coding region AF_0191; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.401
AF_0192
Predicted coding region AF_0192; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.401
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.