Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
AF_2148Conserved hypothetical protein; Similar to SP:P54553 PID:1303967 GB:AL009126 percent identity: 30.74; identified by sequence similarity; putative. (290 aa)    
Predicted Functional Partners:
AF_2147
Predicted coding region AF_2147; Hypothetical protein; identified by GeneMark; putative.
       0.546
truA
Pseudouridylate synthase I (truA) #; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs; Belongs to the tRNA pseudouridine synthase TruA family.
 
 
 
 0.463
AF_2146
GTP-binding protein; Similar to GB:L77117 PID:1591967 percent identity: 65.91; identified by sequence similarity; putative.
       0.456
AF_2266
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58298 PID:1591566 percent identity: 25.56; identified by sequence similarity; putative.
  
     0.453
AF_2144
Thioredoxin (trx-4); Similar to SP:P37395 percent identity: 48.94; identified by sequence similarity; putative.
   
 
 0.443
AF_2145
Glutaredoxin (grx-2); Acts to maintain redox homeostasis; functions as a protein disulfide reductase; Belongs to the glutaredoxin family.
   
 
 0.443
AF_0254
NADH oxidase (noxA-1); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 35.14; identified by sequence similarity; putative.
   
 0.414
AF_0273
Sarcosine oxidase, subunit alpha (soxA); Similar to PID:927591 SP:Q46337 percent identity: 31.11; identified by sequence similarity; putative.
   
 0.414
AF_0395
NADH oxidase (noxA-2); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 35.45; identified by sequence similarity; putative.
   
 0.414
AF_0400
NADH oxidase (noxA-3); Similar to GB:L77117 SP:Q58065 PID:1591361 percent identity: 40.85; identified by sequence similarity; putative.
   
 0.414
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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