Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AF_0983 | AF_1980 | Predicted coding region AF_0983; Hypothetical protein; identified by GeneMark; putative. | Heme exporter protein C (helC); Similar to SP:P29961 GB:X63462 PID:46026 percent identity: 29.02; identified by sequence similarity; putative. | 0.999 |
AF_0983 | AF_2191 | Predicted coding region AF_0983; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region AF_2191; Hypothetical protein; identified by GeneMark; putative. | 0.638 |
AF_0983 | AF_2192 | Predicted coding region AF_0983; Hypothetical protein; identified by GeneMark; putative. | Cytochrome C-type biogenesis protein (nrfE); Similar to GP:1790511 percent identity: 36.13; identified by sequence similarity; putative. | 0.910 |
AF_1980 | AF_0983 | Heme exporter protein C (helC); Similar to SP:P29961 GB:X63462 PID:46026 percent identity: 29.02; identified by sequence similarity; putative. | Predicted coding region AF_0983; Hypothetical protein; identified by GeneMark; putative. | 0.999 |
AF_1980 | AF_2191 | Heme exporter protein C (helC); Similar to SP:P29961 GB:X63462 PID:46026 percent identity: 29.02; identified by sequence similarity; putative. | Predicted coding region AF_2191; Hypothetical protein; identified by GeneMark; putative. | 0.650 |
AF_1980 | AF_2192 | Heme exporter protein C (helC); Similar to SP:P29961 GB:X63462 PID:46026 percent identity: 29.02; identified by sequence similarity; putative. | Cytochrome C-type biogenesis protein (nrfE); Similar to GP:1790511 percent identity: 36.13; identified by sequence similarity; putative. | 0.931 |
AF_2191 | AF_0983 | Predicted coding region AF_2191; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region AF_0983; Hypothetical protein; identified by GeneMark; putative. | 0.638 |
AF_2191 | AF_1980 | Predicted coding region AF_2191; Hypothetical protein; identified by GeneMark; putative. | Heme exporter protein C (helC); Similar to SP:P29961 GB:X63462 PID:46026 percent identity: 29.02; identified by sequence similarity; putative. | 0.650 |
AF_2191 | AF_2192 | Predicted coding region AF_2191; Hypothetical protein; identified by GeneMark; putative. | Cytochrome C-type biogenesis protein (nrfE); Similar to GP:1790511 percent identity: 36.13; identified by sequence similarity; putative. | 0.919 |
AF_2191 | AF_2193 | Predicted coding region AF_2191; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region AF_2193; Hypothetical protein; identified by GeneMark; putative. | 0.762 |
AF_2192 | AF_0983 | Cytochrome C-type biogenesis protein (nrfE); Similar to GP:1790511 percent identity: 36.13; identified by sequence similarity; putative. | Predicted coding region AF_0983; Hypothetical protein; identified by GeneMark; putative. | 0.910 |
AF_2192 | AF_1980 | Cytochrome C-type biogenesis protein (nrfE); Similar to GP:1790511 percent identity: 36.13; identified by sequence similarity; putative. | Heme exporter protein C (helC); Similar to SP:P29961 GB:X63462 PID:46026 percent identity: 29.02; identified by sequence similarity; putative. | 0.931 |
AF_2192 | AF_2191 | Cytochrome C-type biogenesis protein (nrfE); Similar to GP:1790511 percent identity: 36.13; identified by sequence similarity; putative. | Predicted coding region AF_2191; Hypothetical protein; identified by GeneMark; putative. | 0.919 |
AF_2192 | AF_2193 | Cytochrome C-type biogenesis protein (nrfE); Similar to GP:1790511 percent identity: 36.13; identified by sequence similarity; putative. | Predicted coding region AF_2193; Hypothetical protein; identified by GeneMark; putative. | 0.762 |
AF_2193 | AF_2191 | Predicted coding region AF_2193; Hypothetical protein; identified by GeneMark; putative. | Predicted coding region AF_2191; Hypothetical protein; identified by GeneMark; putative. | 0.762 |
AF_2193 | AF_2192 | Predicted coding region AF_2193; Hypothetical protein; identified by GeneMark; putative. | Cytochrome C-type biogenesis protein (nrfE); Similar to GP:1790511 percent identity: 36.13; identified by sequence similarity; putative. | 0.762 |