STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2192Cytochrome C-type biogenesis protein (nrfE); Similar to GP:1790511 percent identity: 36.13; identified by sequence similarity; putative. (503 aa)    
Predicted Functional Partners:
AF_1980
Heme exporter protein C (helC); Similar to SP:P29961 GB:X63462 PID:46026 percent identity: 29.02; identified by sequence similarity; putative.
 
  
 0.887
AF_2191
Predicted coding region AF_2191; Hypothetical protein; identified by GeneMark; putative.
     
 0.852
AF_0983
Predicted coding region AF_0983; Hypothetical protein; identified by GeneMark; putative.
 
  
 0.846
AF_2193
Predicted coding region AF_2193; Hypothetical protein; identified by GeneMark; putative.
       0.762
AF_2386
Molybdopterin oxidoreductase, membrane subunit; Similar to SP:P31077 GB:X65042 PID:48528 percent identity: 30.31; identified by sequence similarity; putative.
 
  
 0.603
AF_1675
Predicted coding region AF_1675; Hypothetical protein; identified by GeneMark; putative.
  
  
 0.564
AF_0515
NADH oxidase, putative; Similar to GB:D21803 PID:464216 percent identity: 25.53; identified by sequence similarity; putative.
  
  
 0.534
AF_0711
Thioredoxin (trx-1); Similar to SP:P06544 GB:M14736 PID:142118 percent identity: 28.36; identified by sequence similarity; putative.
  
  
 0.534
AF_0769
Thioredoxin (trx-2); Similar to GB:L77117 SP:Q57755 PID:1591029 percent identity: 38.46; identified by sequence similarity; putative.
  
  
 0.534
AF_1284
Thioredoxin (trx-3); Similar to SP:P00275 percent identity: 52.94; identified by sequence similarity; putative.
  
  
 0.534
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.