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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2240Predicted coding region AF_2240; Hypothetical protein; identified by GeneMark; putative. (63 aa)    
Predicted Functional Partners:
AF_2241
Predicted coding region AF_2241; Hypothetical protein; identified by GeneMark; putative.
       0.675
purB
Adenylosuccinate lyase (purB); Similar to GB:L77117 PID:1591600 percent identity: 52.27; identified by sequence similarity; putative.
       0.675
AF_2243
3-ketoacyl-CoA thiolase (fadA-3); Similar to GB:M87049 SP:P21151 GB:M59368 GB:M74164 PID:145901 percent identity: 40.83; identified by sequence similarity; putative.
       0.521
AF_2244
acyl-CoA dehydrogenase (acd-11); Similar to SP:P45857 PID:881606 PID:1303933 GB:AL009126 percent identity: 42.55; identified by sequence similarity; putative.
       0.447
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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