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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2276Conserved hypothetical protein; Similar to GB:L77117 PID:1591555 percent identity: 39.31; identified by sequence similarity; putative. (295 aa)    
Predicted Functional Partners:
AF_1245
Na+/H+ antiporter (napA-2); Similar to SP:P26235 PID:148316 percent identity: 28.41; identified by sequence similarity; putative.
   
    0.820
afung
DNA polymerase, bacteriophage-type; Removes uracil bases that are present in DNA as a result of either deamination of cytosine or misincorporation of dUMP instead of dTMP. Can remove uracil from double-stranded DNA containing either a U/G or U/A base pair as well as from single-stranded DNA.
       0.773
AF_0524
Predicted coding region AF_0524; Hypothetical protein; identified by GeneMark; putative.
   
    0.710
cbiHC
Cobalamin biosynthesis precorrin-3 methylase (cbiH); Bifunctional enzyme with a methyltransferase domain that catalyzes the ring contraction and methylation of C-17 in cobalt-factor III to form cobalt-factor IV, and an isomerase domain that catalyzes the conversion of cobalt-precorrin-8 to cobyrinate; In the C-terminal section; belongs to the CobH family.
       0.653
AF_2090-N
Conserved hypothetical protein; Similar to GB:L77117 PID:1592043 percent identity: 48.59; identified by sequence similarity; putative.
  
     0.629
AF_2302
Predicted coding region AF_2302; Hypothetical protein; identified by GeneMark; putative.
   
    0.601
AF_2275
acyl-CoA dehydrogenase (acd-12); Similar to SP:P45867 PID:853760 GB:AL009126 percent identity: 38.87; identified by sequence similarity; putative.
       0.588
AF_2279
Conserved hypothetical protein; Similar to GB:L77117 PID:1500516 percent identity: 35.71; identified by sequence similarity; putative.
       0.571
AF_2278
Pyruvate formate-lyase activating enzyme (act-4); Similar to GB:L77117 SP:Q58218 PID:1499631 percent identity: 42.46; identified by sequence similarity; putative.
       0.560
AF_2280
Conserved hypothetical protein; Similar to GB:L77117 PID:1500516 percent identity: 37.66; identified by sequence similarity; putative.
       0.560
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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