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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2296Cytochrome oxidase,subunit I (cydA-1); Similar to GB:L42023 SP:P45021 PID:1006350 PID:1221192 PID:1205325 percent identity: 22.92; identified by sequence similarity; putative. (362 aa)    
Predicted Functional Partners:
AF_2297
Cytochrome oxidase, subunit I (cydA-2); Similar to GB:L42023 SP:P45021 PID:1006350 PID:1221192 PID:1205325 percent identity: 31.50; identified by sequence similarity; putative.
 
  
 0.994
AF_2295
Group II decarboxylase; Similar to GB:L77117 SP:Q60358 PID:1498811 percent identity: 30.54; identified by sequence similarity; putative.
  
  
 0.793
AF_0833
Desulfoferrodoxin (dfx); Similar to GB:M81168 SP:P20418 GB:M28848 PID:145115 PID:758676 percent identity: 63.03; identified by sequence similarity; putative; Belongs to the desulfoferrodoxin family.
     
 0.547
AF_1449
Pyruvate formate-lyase 2 (pflD); Similar to SP:P32674 GB:U00006 PID:396298 GB:U00096 PID:1790388 percent identity: 37.81; identified by sequence similarity; putative.
 
  
 0.539
AF_2298
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58249 PID:1591526 percent identity: 32.16; identified by sequence similarity; putative; Belongs to the eukaryotic-type primase small subunit family.
       0.497
AF_0831
Rubrerythrin (rr2); Similar to GB:L77117 SP:Q58144 PID:1591449 percent identity: 63.74; identified by sequence similarity; putative.
     
 0.484
AF_2268
Predicted coding region AF_2268; Hypothetical protein; identified by GeneMark; putative.
  
     0.471
AF_2303
Ribosomal protein S6 modification protein (rimK); Similar to GB:L77117 SP:Q58407 PID:1591661 percent identity: 32.21; identified by sequence similarity; putative.
 
   
 0.454
AF_2294
Conserved hypothetical protein; Similar to GP:1707717 percent identity: 22.09; identified by sequence similarity; putative.
       0.442
AF_2299
Predicted coding region AF_2299; Hypothetical protein; identified by GeneMark; putative; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
       0.436
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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