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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AF_2302Predicted coding region AF_2302; Hypothetical protein; identified by GeneMark; putative. (208 aa)    
Predicted Functional Partners:
AF_2303
Ribosomal protein S6 modification protein (rimK); Similar to GB:L77117 SP:Q58407 PID:1591661 percent identity: 32.21; identified by sequence similarity; putative.
       0.847
AF_1245
Na+/H+ antiporter (napA-2); Similar to SP:P26235 PID:148316 percent identity: 28.41; identified by sequence similarity; putative.
   
    0.733
AF_2304
Conserved hypothetical protein; Similar to GB:L77117 SP:Q58701 PID:1591944 percent identity: 35.82; identified by sequence similarity; putative.
       0.645
AF_0275
Surface layer protein B (slgB-1); Similar to PID:602882 percent identity: 30.83; identified by sequence similarity; putative.
   
    0.616
AF_1398
Predicted coding region AF_1398; Hypothetical protein; identified by GeneMark; putative.
   
    0.616
AF_2276
Conserved hypothetical protein; Similar to GB:L77117 PID:1591555 percent identity: 39.31; identified by sequence similarity; putative.
   
    0.601
AF_1528
Conserved hypothetical protein; Similar to GB:L77117 PID:1499710 percent identity: 23.20; identified by sequence similarity; putative.
   
    0.525
pdaD1
Conserved hypothetical protein; Similar to GB:L77117 SP:Q57764 PID:1591036 percent identity: 38.26; identified by sequence similarity; putative; Belongs to the PdaD family.
       0.426
AF_0698
Predicted coding region AF_0698; Hypothetical protein; identified by GeneMark; putative.
   
    0.400
Your Current Organism:
Archaeoglobus fulgidus
NCBI taxonomy Id: 224325
Other names: A. fulgidus DSM 4304, Archaeoglobus fulgidus DSM 4304, Archaeoglobus fulgidus VC-16, Archaeoglobus fulgidus str. DSM 4304, Archaeoglobus fulgidus strain DSM 4304
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.